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Marti Rabassa, Jordi

Total activity: 146
Areas of expertise
Molecular dynamics, Simulation of biomembranes, Simulation of liquid water, Simulation of proton transfer in liquids
h index
23
Professional category
University lecturer
Doctoral courses
Doctor en Ciències Físiques
University degree
Llicenciat en Ciències Físiques
Research group
SIMCON - Computer Simulation in Condensed Matter Research Group
Department
Department of Physics
School
Barcelona School of Informatics (FIB)
E-mail
jordi.martiupc.edu
Contact details
UPC directory Open in new window
Orcid
0000-0002-3721-9634 Open in new window
Scopus Author ID
7202923518 Open in new window
Collaborative networks

Scientific and technological production

1 to 50 of 146 results
 
  • Ion Binding Landscapes and Molecular Dynamics of Phospholipid Membranes  Open access

     Yang, J.
    Department of Physics, Universitat Politècnica de Catalunya
    Theses
  • Free energy landscapes of metal ions at phospholipid membrane surfaces

     Yang, J.; Calero, C.; Bonomi, M.; Marti, J.
    Workshop on biomaterials and their interactions with biological and model membranes
    p. 8
    Presentation's date: 2015-10-19
    Presentation of work at congresses
  • Computer simulation study of DMPC-cholesterol biomembranes in aqueous solution: diffusion, spectroscopy and free energy surfaces

     Marti, J.; Yang, J.; Calero, C.; Bonomi, M.
    From trajectories to reaction coordinates: making sense of molecular simulation data
    p. 13
    Presentation's date: 2015-09-16
    Presentation of work at congresses
  • Proton transfer in liquid water confined inside graphene slabs  Open access

     Tahat, A.; Marti, J.
    Physical review E: statistical, nonlinear, and soft matter physics
    Vol. 92, num. 3, p. 032402-1-032402-10
    DOI: 10.1103/PhysRevE.92.032402
    Date of publication: 2015-09-09
    Journal article
    Access to the full text
  • Specific ion binding at phospholipid membrane surfaces

     Marti, J.; Calero, C.; Bonomi, M.; Yang, J.
    Journal of chemical theory and computation
    Vol. 11, num. 9, p. 4495-4499
    DOI: 10.1021/acs.jctc.5b00540
    Date of publication: 2015-08-18
    Journal article
  • Computer simulation of DMPC biomembranes: water and lipid dynamics and free energy surfaces of metal ions

     Marti, J.; Yang, J.; Bonomi, M.; Calero, C.
    Roma Tre Workshop Water Under Extreme Conditions
    p. 20
    Presentation's date: 2015-06-11
    Presentation of work at congresses
  • 1H nuclear spin relaxation of liquid water from molecular dynamics simulations

     Calero, C.; Marti, J.; Guardia, E.
    Journal of physical chemistry B
    Vol. 119, num. 5, p. 1966-1973
    DOI: 10.1021/jp510013q
    Date of publication: 2015-01-13
    Journal article
  • Characterization of the methane-graphene hydrophobic interaction in aqueous solution from ab initio simulations

     Calero, C.; Masia, M.; Marti, J.; Guardia, E.
    WaterEurope Interdisciplinary Conference about Water
    p. 56
    Presentation's date: 2014-06-13
    Presentation of work at congresses
  • Molecular dynamics simulation study of the influence of cholesterol on ionic adsorption in biological membranes

     Yang, J.; Calero, C.; Marti, J.
    Enhancing molecular simulations with PLUMED
    p. 1
    Presentation's date: 2014-05-29
    Presentation of work at congresses
  • Dynamical aspects of intermolecular proton transfer in liquid water and low-density amorphous ices  Open access

     Tahat, A.; Marti, J.
    Physical review E: statistical, nonlinear, and soft matter physics
    Vol. 89, num. 5, p. 052130-1-052130-10
    DOI: 10.1103/PhysRevE.89.052130
    Date of publication: 2014-05-19
    Journal article
    Access to the full text
  • Diffusion and spectroscopy of water and lipids in fully hydrated dimyristoylphosphatidylcholine bilayer membranes  Open access

     Yang, J.; Calero, C.; Marti, J.
    Journal of chemical physics
    Vol. 140, num. 10, p. 104901-1-104901-13
    DOI: 10.1063/1.4867385
    Date of publication: 2014-03-10
    Journal article
    Access to the full text
  • WM Program manual  Open access

     Tahat, A.; Marti, J.; Tahat, M.
    DOI: 10.3923/itj.2012.1553.1569
    Date: 2014-02-26
    Report
    Access to the full text
  • Pattern recognition and data mining software based on artificial neural networks applied to proton transfer in aqueous environments

     Tahat, A.; Marti, J.; Khwaldeh, A.; Tahat, K.
    Chinese Physics B
    Vol. 23, num. 4, p. 046101-1-046101-12
    DOI: 10.1088/1674-1056/23/4/046101
    Date of publication: 2014-02-10
    Journal article
  • Characterization of the methane-graphene hydrophobic interaction in aqueous solution from ab initio simulations

     Calero, C.; Marti, J.; Guardia, E.; Masia, M.
    Journal of chemical theory and computation
    Vol. 9, num. 11, p. 5070-5075
    DOI: 10.1021/ct400554q
    Date of publication: 2013-09-17
    Journal article
  • Size effects on water adsorbed on hydrophobic probes at the nanometric scale  Open access

     Calero, C.; Gordillo, C.; Marti, J.
    Journal of chemical physics
    Vol. 138, num. 21, p. 214702-1-214702-8
    DOI: 10.1063/1.4807092
    Date of publication: 2013-06-03
    Journal article
    Access to the full text
  • AJAC: atomic data calculation tool in Python

     Tahat, A.; Marti, J.; Tahat, K.; Khwaldeh, A.
    Chinese Physics B
    Vol. 22, num. 4, p. 048901-1-048901-13
    DOI: 10.1088/1674-1056/22/4/048901
    Date of publication: 2013-04-01
    Journal article
  • Atomic data mining numerical methods, source code SQlite with Python

     Khwaldeh, A.; Tahat, A.; Marti, J.; Tahat, M.
    Procedia - Social and behavioral sciences
    Vol. 73, p. 232-239
    DOI: 10.1016/j.sbspro.2013.02.046
    Date of publication: 2013-02-27
    Journal article
  • Methane-graphene potential of mean force from DFT-based molecular dynamics simulations

     Calero, C.; Masia, M.; Marti, J.; Guardia, E.
    WaterSpain
    p. 33
    Presentation's date: 2013-02-08
    Presentation of work at congresses
  • SIMULACION A NANOESCALA DE FASES CONDENSADAS: SALES FUNDIDAS, DISOLUCIONES IONICAS Y LÍQUIDOS MOLECULARES

     Henao, A.; Calero, C.; Sese, G.; Marti, J.; Calvo, A.; Canales, M.; Trullas, J.; Alcaraz, O.; Rey, R.; Ortiz de Urbina, J.; Guardia, E.
    Competitive project
  • Excess protons in mesoscopic water-acetone nanoclusters  Open access

     Semino, R.; Marti, J.; Guardia, E.; Laria, D.
    Journal of chemical physics
    Vol. 137, num. 19, p. 1-8
    DOI: 10.1063/1.4766201
    Date of publication: 2012-11-19
    Journal article
    Access to the full text
  • Software refactoring: solving the time-dependent Schrodinger equation via fast Fourier transforms and parallel programming

     Khwaldeh, A.; Tahat, A.; Marti, J.
    Journal of applied sciences
    Vol. 12, num. 20, p. 2115-2127
    DOI: 10.3923/jas.2012.2115.2127
    Date of publication: 2012-10-30
    Journal article
  • Theoretical study of the H-NMR relaxation times in aqueous ionic solutions

     Calero, C.; Guardia, E.; Marti, J.
    Física Estadística 2012 XVIII Congreso de Física Estadística
    p. 74
    Presentation's date: 2012-10-19
    Presentation of work at congresses
  • Graphene

     Marti, J.
    Collaboration in journals
  • Structure and dynamics of aqueous di-myristoyl-phosphatidyl-choline bilayer membranes

     Yang, J.; Marti, J.
    Faraday Discussion 161: Lipids and Membrane BIophysics
    Presentation's date: 2012-09-11
    Presentation of work at congresses
  • Maintenance and reengineering of software: creating a Visual C++ graphical user interface to perform specific tasks related to soil structure interaction in poroelastic soil

     Khwaldeh, A.; Tahat, A.; Marti, J.; Tahat, M.
    Information technology journal
    Vol. 11, num. 11, p. 1553-1569
    DOI: 10.3923/itj.2012.1553.1569
    Date of publication: 2012-08-27
    Journal article
  • Specific ion effects in aqueous eletrolyte solutions confined within graphene sheets at the nanometric scale

     Sala Viñas, J.; Guardia, E.; Marti, J.
    Physical chemistry chemical physics
    Vol. 14, num. 30, p. 10799-10808
    DOI: 10.1039/C2CP40537G
    Date of publication: 2012-08-14
    Journal article
  • Confinement effects on the structure and dynamics of water and aqueous ionic solutions

    Department of Physics and Nuclear Engineering, Universitat Politècnica de Catalunya
    Theses
  • Dataset Papers in Physical Chemistry

     Marti, J.
    Collaboration in journals
  • Fitting properties from density functional theory based molecular dynamics simulations to parameterize a rigid water force field

     Sala Viñas, J.; Guardia, E.; Marti, J.; Spangberg, D.; Masia, M.
    Journal of chemical physics
    Vol. 136, num. 5, p. 054103-1-054103-10
    DOI: 10.1063/1.3679402
    Date of publication: 2012-02-02
    Journal article
  • Human-computer interaction designs and nuclear meltdowns

     Marti, J.; Tahat, A.
    International Symposium on Nuclear Energy
    p. 19
    Presentation's date: 2011-10-25
    Presentation of work at congresses
  • Aqueous electrolytes confined within functionalized silica nanopores  Open access

     Videla, P.; Marti, J.; Guardia, E.; Laria, D.; Sala, J.
    Journal of chemical physics
    Vol. 135, num. 10, p. 104503-1-104503-6
    DOI: 10.1063/1.3632050
    Date of publication: 2011-09-09
    Journal article
    Access to the full text
  • Aqueous electrolyte solutions within functionalized silica nanopores

     Marti, J.; Videla, P.; H. Laria, D.; Guardia, E.; Sala, J.
    Liquid Matter Conference
    p. Session 7-71
    Presentation's date: 2011-09-08
    Presentation of work at congresses
  • Wetting and prewetting of water on top of a single sheet of hexagonal boron nitride  Open access

     Gordillo, C.; Marti, J.
    Physical review E: statistical, nonlinear, and soft matter physics
    Vol. 84, num. 1, p. 011602-1-011602-5
    DOI: 10.1103/PhysRevE.84.011602
    Date of publication: 2011-07-06
    Journal article
    Access to the full text
  • Confined aqueous electrolytes within cylindrical nanocavities

     Videla, P.; H. Laria, D.; Marti, J.; Guardia, E.; Sala, J.
    Congreso de Física Estadística
    p. 201
    Presentation's date: 2011-06-03
    Presentation of work at congresses
  • Chemical Physics

     Marti, J.
    Collaboration in journals
  • Water on graphene surfaces  Open access

     Gordillo, C.; Marti, J.
    Journal of physics: condensed matter
    Vol. 22, p. 284111-1-284111-8
    DOI: 10.1088/0953-8984/22/28/284111
    Date of publication: 2010-06-21
    Journal article
    Access to the full text
  • Effects of concentration on structure, dielectric, and dynamic properties of aqueous NaCl solutions using a polarizable model

     Sala, J.; Guardia, E.; Marti, J.
    Journal of chemical physics
    Vol. 132, num. 21, p. 214505-1-214505-11
    DOI: 10.1063/1.3429253
    Date of publication: 2010-06-03
    Journal article
  • Molecular dynamics simulations of water confined in graphene nanochannels: from ambient to supercritical environments

     Marti, J.; Guardia, E.; Sala, J.
    Journal of molecular liquids
    Vol. 153, num. 1, p. 72-78
    DOI: 10.1016/j.molliq.2009.09.015
    Date of publication: 2010-03-31
    Journal article
  • Effect of Surface Roughness on the Static and Dynamic Properties of Water Adsorbed on Graphene

     Gordillo, M. C.; Marti, J.
    Journal of physical chemistry B
    Vol. 114, num. 13, p. 4583-4589
    DOI: 10.1021/jp9114332
    Date of publication: 2010-03-17
    Journal article
  • PROPIEDADES DINAMICAS EN FASES LIQUIDAS: SALES FUNDIDAS, DISOLUCIONES IONICAS Y LIQUIDOS MOLECULARES

     Sese, G.; Rey, R.; Trullas, J.; Ortiz de Urbina, J.; Canales, M.; Marti, J.; Bitrián, V.; Calvo, A.; Sala, J.; Alcaraz, O.; Guardia, E.
    Competitive project
  • GRUP DE SIMULACIO PER ORDINADOR EN MATERIA CONDENSADA

     Pastor-Satorras, R.; Sese, G.; Rey, R.; Casulleras, J.; Trullas, J.; Bitrián, V.; Baronchelli, A.; Osychenko, O.; Canales, M.; Boronat, J.; Marti, J.; Macia, A.; Calvo, A.; Ortiz de Urbina, J.; Mazzanti, F.; Astrakharchik, G.; Rota, R.; Sala, J.; Alcaraz, O.; Guardia, E.
    Competitive project
  • Structure and dynamics of an aqueous excess proton inside a non-ionic reverse micelle

     Marti, J.
    Faraday Discussion 144: Multiscale Modelling of Soft Matter
    Presentation's date: 2009-07-20
    Presentation of work at congresses
  • International Journal of Liquid State Sciences

     Marti, J.
    Collaboration in journals
  • Dynamics of water nanodroplets and aqueous protons in non-ionic reverse micelles

     RODRIGUEZ, J.; Laria, D.; Guardia, E.; Marti, J.
    Physical chemistry chemical physics
    Vol. 11, num. 10, p. 1484-1490
    Date of publication: 2009-03
    Journal article
  • Molecular dynamics simulations of supercritical water confined within a carbon-slit pore  Open access

     Marti, J.; Guardia, E.; Gordillo, M. C.; Sala, J.
    Physical review E: statistical, nonlinear, and soft matter physics
    Vol. 79, num. 3, p. 031606-1-031606-10
    DOI: 10.1103/PhysRevE.79.031606
    Date of publication: 2009-03
    Journal article
    Access to the full text
  • Structure and dynamics of liquid water inside reverse micelles

     Marti, J.; Guardia, E.; Rodriguez, J.; Daniel, L.
    Faraday Discussion 144: Multiscale Modelling of Soft Matter
    Presentation of work at congresses
  • Structure of water adsorbed on a single graphene sheet

     Gordillo, M. C.; Marti, J.
    Physical review B: condensed matter and materials physics
    Vol. 78, p. 075432-id-5
    Date of publication: 2008-08
    Journal article
  • Exploring the picosecond time domain of the solvation dynamics of coumarin 153 within beta-cyclodextrins

     RODRIGUEZ, J.; Marti, J.; Guardia, E.; Laria, D.
    Journal of physical chemistry B
    Vol. 112, num. 30, p. 8990-8998
    DOI: 10.1021/jp8023765
    Date of publication: 2008-07
    Journal article
  • Water confined inside graphite nanochannels: a molecular dynamics simulation study

     Guardia, E.; Marti, J.; Gordillo, J.; Sala, J.
    7th Liquid Matter Conference
    p. 1
    Presentation's date: 2008-06-27
    Presentation of work at congresses