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Prats Soler, Clara

Total activity: 63
Professional category
Tenure-track 1 lecturers
Doctoral courses
Física aplicada y simulación en ciencias
University degree
LLICENCIAT FÍSICA
Research group
BIOCOM-SC - Computational Biology and Complex Systems Group
Department
Department of Physics and Nuclear Engineering
School
Barcelona School of Agricultural Engineering (ESAB)
E-mail
clara.pratsupc.edu
Contact details
UPC directory Open in new window
Orcid
0000-0002-1398-7559 Open in new window
ResearcherID
L-4797-2014 Open in new window
Links of interest
Web personal Open in new window

Scientific and technological production

1 to 50 of 63 results
 
  • The bubble model: mathematically explaining how active TB is possible  Open access

     Prats Soler, Clara; Valls Ribas, Joaquim; Sans, Neus; Lopez Codina, Daniel; Vilaplana, Cristina; Marzo, Elena; Cardona Iglesias, Pere Joan
    The Union World Conference on Lung Health
    p. S30-
    Presentation's date: 2014-10-31
    Presentation of work at congresses
    Access to the full text
  • To achieve an earlier IFN-¿ response is not sufficient to control mycobacterium tuberculosis infection in mice  Open access

     Vilaplana, Cristina; Prats Soler, Clara; Marzo, Elena; Barril Basil, Carles; Vegué Llorente, Marina; Díaz, Jorge; Valls Ribas, Joaquim; Lopez Codina, Daniel; Cardona Iglesias, Pere Joan
    PLoS one
    Vol. 9, num. 6, p. e100830-
    DOI: 10.1371/journal.pone.0100830
    Date of publication: 2014-06-24
    Journal article
    Access to the full text
  • Maxent as an inevitable force in cell differentiation  Open access

     Prats Soler, Clara
    BCAM Workshop on Nonlinear Dynamics in Biological Systems
    p. 24
    Presentation's date: 2014-06-20
    Presentation of work at congresses
    Access to the full text
  • The microbial individual-based model INDISIM-YEAST ready to be used in the free access NetLogo modelling environment

     Portell Canal, Xavier; Gras Moreu, Anna Maria; Prats Soler, Clara; Ginovart Gisbert, Marta
    Date of publication: 2014
    Book chapter
    Image
  • Grup de recerca consolidat en Biologia Computacional i Sistemes Complexos

     Echebarria Dominguez, Blas; Auguet Sangra, Carlota Eugenia; Peñaranda Ayllon, Angelina; Ramirez de La Piscina Millan, Laureano; Alvarez Lacalle, Enrique; Alonso Muñoz, Sergio; Giro Roca, Antoni; Ginovart Gisbert, Marta; Lopez Codina, Daniel; Valls Ribas, Joaquim; Prats Soler, Clara; Carbo Moliner, Rosa; Gras Moreu, Anna Maria; Araujo Granda, Pablo Alejandro; Gonzalez Cinca, Ricardo; Arias Calderón, Santiago; Suñol Galofre, Francesc Xavier; Garcia Sabate, Anna; Odriozola Rodriguez Facio, Maria Noel
    Competitive project
  • Mighty small: Observing and modeling individual microbes becomes big science

     Kreft, Jan-Ulrich; Plugge, Caroline M.; Grimm, Volker; Prats Soler, Clara; Leveau, Johan H. J.; Banitz, Thomas; Baines, Stephen; Clark, James; Ros, Alexandra; Klapper, Isaac; Topping, Chris J.; Field, Anthony J.; Schuler, Andrew; Litchman, Elena; Hellweger, Ferdi L.
    Proceedings of the National Academy of Sciences of the United States of America
    Vol. 110, num. 45, p. 18027-18028
    DOI: 10.1073/pnas.1317472110
    Date of publication: 2013-11-05
    Journal article
  • Evolution and role of corded cell aggregation in Mycobacterium tuberculosis cultures

     Cáceres, Neus; Vilaplana, Cristina; Prats Soler, Clara; Marzo, Elena; Llopis Fuste, Isaac; Valls Ribas, Joaquim; Lopez Codina, Daniel; Cardona Iglesias, Pere Joan
    Tuberculosis
    Vol. 93, num. 6, p. 690-698
    DOI: 10.1016/j.tube.2013.08.003
    Date of publication: 2013-11
    Journal article
  • Spatial growth of Mycobacterium tuberculosis in lungs: the bubble model

     Prats Soler, Clara; Valls Ribas, Joaquim; Vilaplana, Cristina; Marzo, Elena; Cardona Iglesias, Pere Joan; Lopez Codina, Daniel
    International Conference on Environmental, Industrial and Applied Microbiology
    p. 513-
    Presentation's date: 2013-10-03
    Presentation of work at congresses
  • The microbial individual-based model INDISIM-YEAST ready to be used in the free access NetLogo modelling environment

     Portell Canal, Xavier; Gras Moreu, Anna Maria; Prats Soler, Clara; Ginovart Gisbert, Marta
    International Conference on Environmental, Industrial and Applied Microbiology
    p. 734
    Presentation's date: 2013
    Presentation of work at congresses
  • A two-compartment system allows lymphatic tissues to control M. tuberculosis infection in the peripheral organs

     Vilaplana Massaguer, Cristina; Prats Soler, Clara; Marzo, Elena; Barril Basil, Carles; Llopis Fuste, Isaac; Díaz, Julio; Valls Ribas, Joaquim; Lopez Codina, Daniel; Cardona Iglesias, Pere Joan
    European Congress of Immunology
    Presentation's date: 2012-09-07
    Presentation of work at congresses
  • A biphasic model for fitting optical density measurements to bacterial cell counts and its application on the instantaneous growth rate evaluation

     Ye, Wei Hong; Prats Soler, Clara; Bover-Cid, Sara; Garriga, Margarita; Lopez Codina, Daniel
    International ICFMH Symposium (Food Micro)
    p. 612
    Presentation's date: 2012-09-04
    Presentation of work at congresses
  • Granuloma formation in lungs due to M.tuberculosis infection through an Individual-based Model

     Llopis Fuste, Isaac; Prats Soler, Clara
    MYCOSPAIN
    Presentation's date: 2012-07-10
    Presentation of work at congresses
  • Agent-based Models in malaria elimination strategy design

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Valls Ribas, Joaquim
    European Meeting on Cybernetics and Systems Research
    Presentation's date: 2012-04
    Presentation of work at congresses
  • Low dose aerosol fitness at the innate phase of murine infection better predicts virulence amongst clinical strains of mycobacterium tuberculosis  Open access

     Cáceres, Neus; Llopis Fuste, Isaac; Marzo, Elena; Prats Soler, Clara; Vilaplana, Cristina; García de Viedma, Darío; Samper, Sofia; Lopez Codina, Daniel; Cardona Iglesias, Pere Joan
    PLoS one
    Vol. 7, num. 1, p. e29010-
    DOI: 10.1371/journal.pone.0029010
    Date of publication: 2012-01-03
    Journal article
    Access to the full text
  • A Bacterial Individual-based Virtual Bioreactor to Test Handling Protocols in a NetLogo Platform

     Ginovart Gisbert, Marta; Prats Soler, Clara
    Vienna International Conference on Mathematical Modelling
    p. 647-652
    DOI: 10.3182/20120215-3-AT-3016.00115
    Presentation's date: 2012
    Presentation of work at congresses
  • Thermodynamic concepts in the study of microbial populations: age structure in plasmodium falciparum infected red blood cells  Open access

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Vidal-Mas, Jaume; Gargallo-Viola, Domingo; Guglietta, Antonio; Giro Roca, Antoni
    PLoS one
    Vol. 6, num. 10, p. e26690 1-e26690 11
    DOI: 10.1371/journal.pone.0026690
    Date of publication: 2011-10-31
    Journal article
    Access to the full text
  • Microbial individual-based models and sensitivity analyses: local and global methods

     Ginovart Gisbert, Marta; Prats Soler, Clara; Portell Canal, Xavier
    International Conference on Predicitive Modeling in Foods
    p. 313-316
    Presentation's date: 2011-09-13
    Presentation of work at congresses
    Image
  • New insights on the virulence determination of M. tuberculosis clinical strains by applying different "in vitro" and "in vivo" strategies

     Cáceres, Neus; Llopis Fuste, Isaac; Marzo, Elena; Vilaplana, Cristina; Díaz Muñoz, Jorge Gerardo; Alonso, María; García de Viedma, Darío; Alonso, Henar; Samper, Sofia; Prats Soler, Clara; Lopez Codina, Daniel; Cardona, Joan Pere
    International Conference on the Pathogenesis of Mycobacterial Infections
    p. 97
    Presentation's date: 2011-07-01
    Presentation of work at congresses
  • Método de valoración de virulencia de cepas de Mycobacterium tuberculosis complex y uso de los agregados bacilares de cepas de Mycobacterium tuberculosis complex en cultivo líquido para dicha valoración

     Prats Soler, Clara; Llopis Fuste, Isaac; Lopez Codina, Daniel; Caceres Casademunt, Neus; Cardona Iglesias, Pere Joan; Vilaplana Massaguer, Cristina
    Date of request: 2011-06-22
    Invention patent
  • Sensitivity analysis and individual-based models in the study of yeast populations

     Ginovart Gisbert, Marta; Prats Soler, Clara; Portell Canal, Xavier
    European Conference on Modelling and Simulation
    p. 41-47
    Presentation's date: 2011-06
    Presentation of work at congresses
    Image
  • Exploring the lag phase and growth initiation of a yeast culture by means of an individual-based model

     Ginovart Gisbert, Marta; Prats Soler, Clara; Portell Canal, Xavier; Silbert, Moises
    Food microbiology
    Vol. 28, num. 4, p. 810-817
    DOI: 10.1016/j.fm.2010.05.004
    Date of publication: 2011
    Journal article
    Image
  • Analysis of the effect of inoculum characteristics on the first stages of a growing yeast population in beer fermentations by means of an individual-based model

     Ginovart Gisbert, Marta; Prats Soler, Clara; Portell Canal, Xavier; Silbert, Moises
    Journal of industrial microbiology and biotechnology
    Vol. 38, p. 153-165
    DOI: 10.1007/s10295-010-0840-4
    Date of publication: 2011
    Journal article
  • Modelización basada en el individuo (IBM) perspectiva multidisclipinar en microbiologia aplicada: alimentos, medioambiente y salud

     Prats Soler, Clara; Valls Ribas, Joaquim; Carbo Moliner, Rosa; Ginovart Gisbert, Marta; Giro Roca, Antoni; Gras Moreu, Anna Maria; Portell Canal, Xavier; Ferrer Savall, Jordi; Silbert, Moises; Lopez Codina, Daniel
    Competitive project
  • Individual-based modelling and simulation of microbial processes: yeast fermentation and multi-species composting

     Prats Soler, Clara; Ferrer Savall, Jordi; Gras Moreu, Anna Maria; Ginovart Gisbert, Marta
    Mathematical and Computer Modelling of Dynamical Systems (online)
    Vol. 16, num. 3, p. 489-510
    DOI: 10.1080/13873954.2010.481809
    Date of publication: 2010-12-06
    Journal article
    Image
  • Contribution of individual-based models in malaria elimination strategy design

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Valls Ribas, Joaquim; Gargallo Viola, Domingo
    Parasite to prevention, advandes in understanding malaria
    p. 27
    DOI: 10.1186/1475-2875-9-S2-P9
    Presentation's date: 2010-10-20
    Presentation of work at congresses
  • Analysis of the population structure of Plasmodium falciparum-infected erythrocytes  Open access

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Gargallo Viola, Domingo; Valls Ribas, Joaquim
    Current opinion in celular host-pathogen interactions
    p. 3
    Presentation's date: 2010-09-05
    Presentation of work at congresses
    Access to the full text
  • Population-based and individual-based modelling of high hydrostatic pressure effect in Listeria monocytogenes on sliced dry-cured ham  Open access

     Prats Soler, Clara; Bover Cid, Sara; Garriga, Margarita; Aymerich Calvet, Teresa; Ferrer Savall, Jordi; Lopez Codina, Daniel
    International ICFMH Symposium (Food Micro)
    p. 174
    Presentation's date: 2010-09-01
    Presentation of work at congresses
    Access to the full text
  • Combined use of local and global sensitivity analyses for the investigation of an individual-based model of yeast populations  Open access

     Prats Soler, Clara; Portell Canal, Xavier; Gras Moreu, Anna Maria; Ginovart Gisbert, Marta
    International ICFMH Symposium (Food Micro)
    p. 173
    Presentation's date: 2010-09-01
    Presentation of work at congresses
    Access to the full text
  • On the evolution of cell size distribution during bacterial growth cycle: experimental observations and individual-based model simulations  Open access

     Prats Soler, Clara; Ferrer Savall, Jordi; Lopez Codina, Daniel; Giro Roca, Antoni; Vives-Rego, Josep
    African journal of microbiology research
    Vol. 4, num. 5, p. 400-407
    Date of publication: 2010-03
    Journal article
    Access to the full text
  • Microbiología predictiva: una herramienta imprescindible en seguridad alimentaria  Open access

     Prats Soler, Clara; Ferrer Savall, Jordi; Lopez Codina, Daniel
    Reunión Científica Hispano-Marroquí sobre Seguridad Alimentaria
    p. 34-35
    Presentation's date: 2009-10-20
    Presentation of work at congresses
  • Mathematical modelling methodologies in predictive food microbiology: a SWOT analysis

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Vives-Rego, Josep
    International journal of food microbiology
    Vol. 134, num. 1-2, p. 2-8
    Date of publication: 2009-08
    Journal article
    Image
  • Individual-based modelling and simulation of microbial processes: yeast fermentation and multispecies composting

     Prats Soler, Clara; Ferrer Savall, Jordi; Gras Moreu, Anna Maria; Ginovart Gisbert, Marta
    Vienna International Conference on Mathematical Modelling (MATHMOD 2009)
    Presentation's date: 2009-02-12
    Presentation of work at congresses
  • Individual-based modelling and simulation: towards a better understanding of growth dynamics from small inocula  Open access

     Dalmau Andreu, Roger; Portell Canal, Xavier; Prats Soler, Clara; Ginovart Gisbert, Marta; Giro Roca, Antoni
    SAFE Consortium International Congress on Food Safety: Novel Technologies and Food Quality, Safety and Health
    p. 153-154
    Presentation's date: 2009
    Presentation of work at congresses
    Access to the full text
  • Optimization methods for individual-based model parameter estimation in predictive microbiology

     Prats Soler, Clara; Bernaerts, K.; Standaert, A.; Ferrer Savall, Jordi; Lopez Codina, Daniel; Van Impe, J.
    Vienna Conference on Mathematical Modelling
    p. 2635-2638
    Presentation's date: 2009
    Presentation of work at congresses
    Image
  • Effect of the inoculum characteristics on the first stages of a growing yeast population in beer fermentations by means of an individual-based Model  Open access

     Portell Canal, Xavier; Prats Soler, Clara; Silbert, Moises; Ginovart Gisbert, Marta
    International Conference on Environmental, Industrial and Applied Microbiology
    p. 292
    Presentation of work at congresses
    Access to the full text
  • Exploring lag phase and growth initiation of a yeast culture by means of an Individual-based Model  Open access

     Portell Canal, Xavier; Prats Soler, Clara; Silbert, Moises; Ginovart Gisbert, Marta
    International Conference on Predicitive Modeling in Foods
    p. 49-52
    Presentation of work at congresses
    Access to the full text
  • Individual-based Modelling and simulation of microbial processes: yeast fermentation and multi-species composting

     Prats Soler, Clara; Ferrer Savall, Jordi; Gras Moreu, Anna Maria; Ginovart Gisbert, Marta
    Vienna Conference on Mathematical Modelling
    p. 1495-1506
    Presentation's date: 2009
    Presentation of work at congresses
  • Effect of the haematocrit layer geometry on Plasmodium falciparum static thin-layer in vitro cultures  Open access

     Ferrer Savall, Jordi; Rosal, M; Vidal Sans, Josep; Prats Soler, Clara; Valls Ribas, Joaquim; Herreros, E; Lopez Codina, Daniel; Gargallo, D
    Malaria journal
    Vol. 7, num. 203
    DOI: doi:10.1186/1475-2875-7-203
    Date of publication: 2008-10
    Journal article
    Access to the full text
  • Individual-based modelling of bacterial cultures in the study of the lag phase  Open access

     Prats Soler, Clara
    Department of Applied Physics, Universitat Politècnica de Catalunya
    Theses
  • Analysis and IbM simulation of the stages in bacterial lag phase: basis for an updated definition

     Prats Soler, Clara; Giro Roca, Antoni; Ferrer Savall, Jordi; Lopez Codina, Daniel; Vives-Rego, J
    Journal of theoretical biology
    Vol. 252, num. 1, p. 56-68
    DOI: doi:10.1016/j.jtbi.2008.01.019
    Date of publication: 2008-05
    Journal article
    Image
  • Individual-based modelling: an essential tool for microbiology

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel
    Journal of biological physics
    Vol. 34, num. 1-2, p. 19-37
    Date of publication: 2008-04
    Journal article
    Image
  • Individual-based modelling and flow cytometry: two suitable tools for predictive microbiology

     Prats Soler, Clara; Ferrer Savall, Jordi; Lopez Codina, Daniel; Vives-Rego, J
    International Conference on Simulation and Modelling in the Food and Bio-Industry
    p. 91-95
    Presentation's date: 2008
    Presentation of work at congresses
  • Mathematical modelling methodologies in predictive food microbiology: a SWOT analysis

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel; Vives-Rego, J
    International ICFMH Symposium
    p. 78
    Presentation's date: 2008
    Presentation of work at congresses
  • INDISIM, an Individual-based Model to simulate microbial cultures

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel
    Annual conference of agent-based modelers, platform developers and users
    p. 1
    Presentation of work at congresses
  • Individual based Modelling (IbM) de sistemas microbiológicos para el desarrollo sostenible: medio ambiente, seguridad alimentaria y salud

     Giro Roca, Antoni; Prats Soler, Clara; Lopez Codina, Daniel; Silbert, Moises; Valls Ribas, Joaquim; Gras Moreu, Anna Maria; Ginovart Gisbert, Marta; Portell Canal, Xavier; Ferrer Savall, Jordi
    Competitive project
  • Individual-based model and simulation of Plasmodium falciparum infected erythrocyte in vitro cultures

     Ferrer Savall, Jordi; Vidal Sans, Josep; Prats Soler, Clara; Valls Ribas, Joaquim; Herreros, E; Lopez Codina, Daniel; Giro Roca, Antoni; Gargallo, D
    Journal of theoretical biology
    Vol. 248, num. 3, p. 448-459
    Date of publication: 2007-10
    Journal article
    Image
  • Evolution of biomass distribution during bacterial lag phase through flow cytometry, particle analysis and Individual-based Modelling

     Prats Soler, Clara; Ferrer Savall, Jordi; Flix, B; Giro Roca, Antoni; Lopez Codina, Daniel; Vives-Rego, J
    International Conference Predictive Modelling in Foods
    p. 301-304
    Presentation of work at congresses
  • IbM: An essential tool for microbiology

     Ferrer Savall, Jordi; Prats Soler, Clara; Lopez Codina, Daniel
    International Conference of Biological Physics
    p. 91
    Presentation of work at congresses
  • Spatial properties in Individual- based modelling of microbial systems. Study of the composting process.

     Prats Soler, Clara; Ferrer Savall, Jordi; Giro Roca, Antoni; Lopez Codina, Daniel; Valls Ribas, Joaquim
    Date of publication: 2006-10
    Book chapter
    Image
  • An individual based model to study the main groups of microbes active in composting process

     Gras Moreu, Anna Maria; Ginovart Gisbert, Marta; Prats Soler, Clara
    Date of publication: 2006-10
    Book chapter
    Image