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SPIn: model selection for phylogenetic mixtures via linear invariants

Autor
Kedzierska, A.; Drton, M.; Guigo Serra, Roderic; Casanellas, M.
Tipus d'activitat
Article en revista
Revista
Molecular biology and evolution
Data de publicació
2012-03
Volum
29
Número
3
Pàgina inicial
929
Pàgina final
937
DOI
https://doi.org/10.1093/molbev/msr259 Obrir en finestra nova
Projecte finançador
Geometría de variedades algebraicas y aplicaciones
Repositori
http://hdl.handle.net/2117/14907 Obrir en finestra nova
URL
http://mbe.oxfordjournals.org/content/early/2011/12/23/molbev.msr259.full.pdf+html Obrir en finestra nova
Resum
In phylogenetic inference, an evolutionarymodel describes the substitution processes along each edge of a phylogenetic tree. Misspecification of the model has important implications for the analysis of phylogenetic data. Conventionally, however, the selection of a suitable evolutionary model is based on heuristics or relies on the choice of an approximate input tree. We introduce a method for model Selection in Phylogenetics based on linear INvariants (SPIn), which uses recent insights on linear...
Citació
Kedzierska, A. [et al.]. SPIn: model selection for phylogenetic mixtures via linear invariants. "Molecular biology and evolution", Octubre 2011, núm. January, p. 1-9.
Grup de recerca
GEOMVAP - Geometria de Varietats i Aplicacions

Participants

  • Kedzierska, A.M.  (autor)
  • Drton, M.  (autor)
  • Guigo Serra, Roderic  (autor)
  • Casanellas Rius, Marta  (autor)